Selected Publications
- Choi SC, YS Chung, Kim C. 2016. Perspectives on the genomics research of important crops in the tribe Andropogoneae: Focusing on the SaccharumComplex. KJOAS. 43:1-13
- Kim C, Guo H, Kong W, Chandnani R, Shuang L-S, Paterson AH. 2016. Application of genotyping by sequencing technology to a variety of crop breeding programs. Plant Science. 242:14-22.
- Kim C, Guo H, Lee T-H, Lee S. 2016. Diversity and preliminary association analyses of 20 Camelina spp. European accessions using SNP genotyping. Horticulture, Environment, and Biotechnology. In Press
- Kim C, Wang X, Lee T-H, Jakob K, Lee G-J, Paterson AH. 2014. Comparative Analysis of Miscanthus and Saccharum Reveals a Shared Whole-Genome Duplication but Different Evolutionary Fates. The Plant Cell. 26:2420-2429.
- Kim C, Lee T-H, Guo H, Chung S J, Paterson AH, Kim D-S, Lee G-J. 2014. Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships. BMC Plant Biology. 14:134
- Kim C, Lee T-H, Robertson JS, Pierce GJ, Compton RO, Paterson AH. 2013. A genome-wide BAC end-sequence survey of sugarcane elucidates genome composition, and identifies BACs covering much of the euchromatin. Plant Molecular Biology. 81:139-147.
- Kim C, Zhang D, Auckland SA, Rainville LK, Jakob K, Kronmiller B, Sacks EJ, Deuter M, Paterson AH. 2012. SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum. Theoretical and Applied Genetics. 124:1325-1338.
- Kim C, Robertson JS, Paterson AH. 2011. Inference of subgenomic origin of BACs in an interspecific hybrid sugarcane cultivar by overlapping oligonucleotide hybridizations. Genome. 54:727-737.
- Kim C, Lemke C, Paterson AH. 2009. Functional dissection of drought-responsive gene expression patterns in Cynodon dactylon L. Plant Molecular Biology. 70:1-16.
- Kim C, Tang H, Paterson AH. 2009. Duplication and divergence of grass genomes: Integrating the Chloridoids. Tropical Plant Biology. 2:51-62.
- Kim C, Hong SH, Kang BH, Shim SI. 2008. Physiological responses of paddy weeds to bensulfuron-methyl herbicide. Journal of Agriculture & Life Science. 42:1-8.
- Kim C, Jang CS, Kamps TL, Robertson JS, Feltus FA, Paterson AH. 2008. Transcriptome analysis of leaf tissue from Cynodon dactylon L. by a normalized cDNA library. Functional Plant Biology. 35:585-594.
Book Chapters
Paterson AH, Wang X, Tang H, Kim C. Comparative genomics of grasses: A Saccharinae-centric view. In “Genomics of the Saccharinae” Plant Genetics and Genomics: Crops and Models, Vol. 11, edited by Andrew H. Paterson, New York, NY: Springer, 2013.
Presentations
- Changsoo Kim, Hui Guo, Andrew H Paterson. 2016. Sugarcane is an allopolyploid. PLANT AND ANIMAL GENOME XXIV CONFERENCE. San Diego, CA.
- Changsoo Kim, Xiyin Wang, Tae-Ho Lee, Katrin Jakob, Geung-Joo Lee, Andrew H Paterson. 2015. Comparative Analysis of Miscanthus and Saccharum Reveals a Shared Whole-Genome Duplication but Different Evolutionary Fates. PLANT AND ANIMAL GENOME XXIII CONFERENCE. San Diego, CA.
- Changsoo Kim, Tae-Ho Lee, Jon S Robertson, Gary J Pierce, Rosana O Compton, Andrew H Paterson. 2013. A genome-wide BAC end-sequence survey of sugarcane elucidates genome composition, and identifies BACs covering much of the euchromatin. PLANT AND ANIMAL GENOME XXI CONFERENCE. San Diego, CA
- Changsoo Kim, Dong Zhang, Susan A. Auckland, Lisa K. Rinville, Katrin Jakob, Brent Kronmiller, Erik J. Sacks, Martin Deuter, Andrew H. Paterson. 2012. Genetic Maps of Miscanthus sacchariflorus Robustus and M. sinensis using EST-derived SSRs, and Their Preliminary Comparison to Sorghum. PLANT AND ANIMAL GENOME XX CONFERENCE. San Diego, CAM
- Changsoo Kim, Jon S Robertson, Andrew H. Paterson. 2010. Inference of subgenomic origin in the genome of sugarcane cultivar by species-specific hybridizations. PLANT AND ANIMAL GENOME XVIII CONFERENCE. San Diego, CA
- Changsoo Kim, Haibao Tang, Andrew H. Paterson. 2009. Duplication and divergence of grass genomes: Integrating the Chloridoids. PLANT AND ANIMAL GENOME XVII CONFERENCE. San Diego, CA.
- Changsoo Kim, Andrew H. Paterson. 2007. Discovery of Stress-responsive Cynodon Genes by cDNA Sequences and Expression Profiles. USGA WARM-SEASON RESEARCH WORKSHOP, Athens, GA.
- Changsoo Kim, Terry L. Kamps, Andrew H. Paterson. 2005. Construction of a normalized cDNA library from Cynodon dactylon. USGA WARM-SEASON RESEARCH WORKSHOP, Oklahoma City, OK.